Problem solved in full
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A reading of 2.49, and a concentration worth ±107 9 steps
An enzyme assay is read at 340 nm in a 1 cm cuvette. The screen shows 2.49, and the analyst writes down 400 µmol/L of NADH. The arithmetic is correct. Work out what that number is worth, what should have been done instead, and what the instrument was actually reporting.
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NADH absorbs at 340 nm with a molar absorptivity of 6,220 L mol⁻¹ cm⁻¹. The concentration is 400 µmol/L, which is 4.0000 × 10⁻⁴ mol/L, and the cell is 1 cm across. That is the whole of the law, and the tool prints the product under Absorbance A.
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Absorbance is defined as −log₁₀T, so invert it. About three photons in a thousand get out of the cuvette. Everything the analyst is about to claim rests on the instrument telling that apart from two in a thousand, or from four.
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Now put an uncertainty on it. The instrument measures T, so write c in terms of T and differentiate. The ε and the ℓ appear in both the derivative and the concentration itself, and they cancel: the relative uncertainty depends on the reading alone, not on what is in the cuvette or how wide the cuvette is.
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A decent bench instrument is good to about 0.5% of the transmittance scale, so σT = 0.005. Rewriting the expression in terms of A rather than T lets you use the number the first step already produced. The tool prints 26.85% under Uncertainty in the concentration: the answer is 400 µmol/L give or take 107.
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Where would that have been smallest? The denominator T ln(1/T) is what we want largest, and it has a single maximum: differentiating gives −ln T − 1, which is zero at T = 1/e. So the best available reading is A = log₁₀e = 0.4343, and the uncertainty there is e·σT = 1.36%. The analyst's reading cost 19.75 times that.
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Reading too pale costs 2.01× at A = 0.1. Reading too dark costs 53.26× at A = 3. Those two readings are a comparable distance from the optimum and nowhere near a comparable distance in accuracy, which is why the error panel is drawn on a logarithmic axis and why the advice a lab gives is to dilute rather than to concentrate.
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So dilute. 2.4880 ÷ 0.4343 = 5.73, which brings the sample to 69.82 µmol/L, the figure under Concentration at the optimum. One pipetting step, and the same instrument answers 19.75 times more precisely. The dilution carries an uncertainty of its own that adds in quadrature, and it would have to be worse than 26.8% to make the trade a bad one.
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None of this is what the screen said. With 0.1% stray light the instrument reported 2.3720, which is 4.7% short of the absorbance the chemistry produced, and it could not have reported above 3.0004 whatever went into the cuvette. The analyst's 2.49 was already two errors deep before the uncertainty was counted.
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A monochromator does not deliver a single wavelength. Suppose half the beam sits where ε is 20% lower, which is what a finite slit width does on the flank of an absorption peak. The detector adds the two intensities and the logarithm is taken once, afterwards, so the apparent absorbance falls below the intensity-weighted average of the two. At a nominal A of 1 the instrument reads 0.8886 against an average of 0.9000; at a nominal 2 it reads 1.7555 against 1.8000. The shortfall grows with concentration, so the calibration line bends toward the concentration axis instead of shifting. Anchor a single-point calibration at the optimum, use it at A = 3, and the concentration comes out 3.03% low. None of that is on the panel above. A second ε and a beam split are three more controls than this page has.
Answer
400 µmol/L give or take 107. The arithmetic was right and the reading was in the wrong place: 0.33% of the beam through the cell, 26.85% on the concentration, 19.75 times the uncertainty the same instrument would have given at A = 0.4343.
Diluting 5.73× to 69.82 µmol/L gives 69.82 ± 0.95, which multiplies back to 400 ± 5.4. Same sample, same instrument, same afternoon.
And the 2.4880 was never on the screen. Stray light had taken 4.7% of it before the analyst read anything at all. -
References (5)
- The concentration half of the law, and the paper the name comes from: August Beer, "Bestimmung der Absorption des rothen Lichts in farbigen Flüssigkeiten", Annalen der Physik 162(5), 78–88, 1852. doi:10.1002/andp.18521620505
- Who actually wrote what, which the usual attribution gets wrong: Heinz G. Pfeiffer and Herman A. Liebhafsky, "The origins of Beer's law", Journal of Chemical Education 28(3), 123, 1951. doi:10.1021/ed028p123
- The photometric error curve that carries their names: F. Twyman and G. F. Lothian, "Conditions for securing accuracy in spectrophotometry", Proceedings of the Physical Society 45(5), 643–662, 1933. doi:10.1088/0959-5309/45/5/304
- An openly readable derivation of the same result, in the same notation: "13.3: Effect of Noise on Transmittance and Absorbance Measurements", Instrumental Analysis, Chemistry LibreTexts (CC BY-NC-SA 4.0).
- Where the 6,220 L mol⁻¹ cm⁻¹ for NADH at 340 nm comes from: B. L. Horecker and Arthur Kornberg, "The extinction coefficients of the reduced band of pyridine nucleotides", Journal of Biological Chemistry 175(1), 385–390, 1948. doi:10.1016/S0021-9258(18)57268-9